| Institut for Matematik og Datalogi |
pdflatex as compiler with the -shell-escape option (don't use that option with code you don't trust!). The following macros are now available. The should all be used as substitude for \includegraphics. The options in all macros can be omitted, and they will be passed down to \includegraphics.
\graphvizBase[options]{layout engine}{complete graph data}: for compiling and including a general graphviz graph.\neatoGraph[options]{graph data}: expands to \graphvizBase[options]{neato}{graph {graph data}}\neatoDigraph[options]{graph data}: expands to \graphvizBase[options]{neato}{digraph {graph data}}\obabel[options]{smiles string}: uses OpenBabel to draw the molecule in 2D.dot in the path. The obabel macro requires OpenBabel 2.3 or higher to be installed and have obabel in the path.jlandersen@imada.sdu.dk